The data in: phiX_tst1_rd_srt.bex 
was analyzed on the ../Genome/NC_001422_phiX.gb.fa sequence
and the annotations in ../Genome/NC_001422_phiX.gb.cds 
at 09-11-2011; 16:31:23
Program: ../../R2R_Analyzer.pl
Mut/InDels in repeat regions are not reported since the variable $no_mut_in_repeats = 'y' is set

Min number of InDel reads to report:  4
Min number of Mutation reads to report:  4
Min frequency of mut reads cmp to matching reads:  1
Min overlap between two consecutive reads to confirm overlapping sequence reads: 7
Min distance for printing & analysing reads; 0 prints all reads: 1

       panel_No  P_Pos   Mut/InDel     #Mut  #Mut+  #Mut- #Match ID_qual Repeat  SNP?  Suggested mutation(s)      Annotation(s)
panel:        0    587   Mutation:      173    122     51      0                        g>a (1.00)     V>V; W>*;   (major transcript)	 (minor transcript)	 (D)	 (E)
panel:        0    833   Mutation:      146     50     96      0                        g>a (1.00)     A>A; R>Q;   (major transcript)	 (minor transcript)	 (D)	 (E)
panel:        2    731   Mutation:      104     80     24      0                        a>g (1.00)          N>D;   (major transcript)	 (G)
panel:        2    793   Mutation:      154    106     48      0                        c>t (1.00)          P>P;   (major transcript)	 (G)
panel:        2    811   Mutation:      132     95     37      0                        c>t (1.00)          N>N;   (major transcript)	 (G)
panel:        3    132   Mutation:       26     18      8     22                        g>a (0.92)          A>T;   (major transcript)	 (H)
panel:        4    999   InDel:          39     39      0     32    1.45                                           (A)	 (A* /protein_id=)